Basic Information
Locus ID:
Ftri12G29061
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat receptor-like tyrosine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 1597063 | 1601176 | + | Ftri12G29061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 87,639.12 Da | 28.79 | 113.64 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 142 | 164 | 0.076 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 617 | 752 | 1.6E-17 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 231 | 6.12E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 613 | 753 | 4.99E-29 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 170 | 495 | 3.3E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 174 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 526 | 6.3E-86 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 235 | 1.2E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 597 | 760 | 2.3E-28 | - |
| SMART | SM00369 | LRR_typ_2 | 453 | 476 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 164 | 27.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 142 | 165 | 7.557941 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 614 | 794 | 19.099993 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 737 | 749 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021972001.1 | leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Helianthus annuus] | 0 |
| O22938 | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 OS=Arabidopsis thaliana OX=3702 GN=PXC3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6NKM1 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_20840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Ftri12G29061.