HalophFGD

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Basic Information
Locus ID: Ftri12G27612
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr12 1822794 1823435 - Ftri12G27612
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.88 24,599.38 Da 42.78 96.10 0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 9 39 3.3E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 9 118 3.14E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 1 69 3.9E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_022004333.1 putative F-box only protein 15 [Helianthus annuus] 0
TrEMBL A0A251SV84 Putative F-box domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0416541 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 1 AsparagusV1_04.850.V1.1
Asteraceae Flaveria trinervia 25 Ftri10G02265, Ftri10G33221, Ftri11G12082, Ftri11G33565 ...
Ftri12G27612, Ftri12G29141, Ftri16G04664, Ftri16G13241, Ftri16G29382, Ftri1G21041, Ftri2G34093, Ftri3G14959, Ftri3G18031, Ftri4G03317, Ftri4G21166, Ftri4G31008, Ftri4G32713, Ftri5G21974, Ftri6G20582, Ftri7G11045, Ftri7G23034, FtriNA02227, FtriNA07995, FtriNA13567, FtriNA25090
Poaceae Lolium multiflorum 1 gene-QYE76_020523
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.