Basic Information
Locus ID:
Ftri12G25941
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 643470 | 649417 | - | Ftri12G25941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 64,302.78 Da | 42.98 | 88.01 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 120 | 382 | 3.38749E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 121 | 383 | 3.1E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 117 | 421 | 2.56E-81 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 411 | 564 | 9.03E-17 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 398 | 6.2E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 401 | 492 | 4.3E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 210 | 4.1E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 408 | 562 | 4.3E-16 | - |
| SMART | SM00220 | serkin_6 | 121 | 383 | 1.4E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 121 | 383 | 49.799042 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 127 | 153 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 245 | 257 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021971248.1 | CDPK-related kinase 1 [Helianthus annuus] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VN62 | Putative EF-hand domain pair, Mitogen-activated protein (MAP) kinase kinase kinase kinase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0008091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology