Basic Information
Locus ID:
Ftri12G23813
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 111047847 | 111053059 | - | Ftri12G23813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 143,584.55 Da | 46.70 | 102.21 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 154 | 374 | 5.3E-36 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 146 | 388 | 2.15E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 507 | 1159 | 1.28E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 958 | 1224 | 5.9E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 287 | 376 | 1.9E-18 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 138 | 281 | 5.3E-25 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 488 | 899 | 7.5E-21 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 242 | 256 | 1.1E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 168 | 183 | 1.1E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 320 | 334 | 1.1E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 603 | 619 | 1.1E-17 | - |
| Coils | Coil | Coil | 38 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021978143.1 | disease resistance protein At4g27190 [Helianthus annuus] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6P375 | NB-ARC domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14126 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology