Basic Information
Locus ID:
Ftri12G21440
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 9935852 | 9939598 | + | Ftri12G21440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 38,549.29 Da | 36.16 | 89.32 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 329 | 3.2E-77 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 17 | 333 | 1.15E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 329 | 4.1E-103 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 285 | 350 | 0.29 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 10 | 123 | 4.4E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 330 | 46.228424 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_021976488.1 | homocysteine S-methyltransferase 2 [Helianthus annuus] | 0 |
| P56707 | Selenocysteine methyltransferase OS=Astragalus bisulcatus OX=20406 GN=SMTA PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U3T7 | Putative selenocysteine Se-methyltransferase OS=Helianthus annuus OX=4232 GN=SMTA PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology