Basic Information
Locus ID:
Ftri12G19687
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 126119421 | 126122994 | - | Ftri12G19687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 66,651.85 Da | 39.74 | 106.82 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 62 | 103 | 1.1E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 248 | 271 | 0.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 489 | 511 | 1.3 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 222 | 245 | 0.0041 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 326 | 581 | 2.3E-40 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 402 | 3.92E-35 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 99 | 2.49E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 427 | 624 | 3.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 209 | 1.9E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 426 | 1.1E-40 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 146 | 170 | 430.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 488 | 513 | 54.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 329 | 354 | 0.28 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 381 | 406 | 85.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 197 | 222 | 0.071 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 515 | 540 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 171 | 196 | 5.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 249 | 274 | 3.8E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 355 | 380 | 2.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 435 | 460 | 310.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 461 | 486 | 0.014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 223 | 248 | 6.4E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 541 | 565 | 15.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021987889.1 | EIN3-binding F-box protein 1 [Helianthus annuus] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VSG6 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0030871 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology