Basic Information
Locus ID:
Ftri12G18805
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 118870797 | 118874611 | - | Ftri12G18805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 38,364.75 Da | 51.40 | 66.86 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 194 | 328 | 7.4E-26 | IPR006571 |
| SMART | SM00584 | 109ultra | 168 | 332 | 7.4E-26 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 169 | 332 | 22.879589 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 151 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_021981939.1 | oxidation resistance protein 1 [Helianthus annuus] | 0 |
| Q8N573 | Oxidation resistance protein 1 OS=Homo sapiens OX=9606 GN=OXR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251VR35 | Putative TLD-domain containing nucleolar protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0022991 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology