Basic Information
Locus ID:
Ftri12G15261
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Chitin elicitor receptor kinase 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 32879855 | 32886566 | + | Ftri12G15261 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 47,333.42 Da | 26.76 | 93.41 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 141 | 403 | 3.53871E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 138 | 405 | 7.9E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 406 | 1.25E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 426 | 2.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 115 | 205 | 5.2E-28 | - |
| SMART | SM00220 | serkin_6 | 135 | 408 | 2.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 135 | 409 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 141 | 163 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021969898.1 | lysM domain receptor-like kinase 3 isoform X1 [Helianthus annuus] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VMN1 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0006491 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology