Basic Information
Locus ID:
Ftri12G13218
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 122461182 | 122462678 | + | Ftri12G13218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 38,539.81 Da | 52.26 | 73.57 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 162 | 207 | 1.5E-13 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 113 | 159 | 2.6E-7 | - |
| Pfam | PF12937 | F-box-like | 11 | 54 | 1.5E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 60 | 1.18E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 86 | 308 | 8.76E-42 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 306 | 3.3E-41 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 50 | 1.3E-5 | - |
| SMART | SM00256 | fbox_2 | 14 | 54 | 6.9E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 173 | 220 | 1.1E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 124 | 172 | 2.0E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 224 | 271 | 17.0 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021983402.1 | F-box/kelch-repeat protein At2g44130 [Helianthus annuus] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251VSC9 | Putative F-box domain, Galactose oxidase, beta-propeller OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0024791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology