Basic Information
Locus ID:
Ftri12G12330
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 126497239 | 126500437 | - | Ftri12G12330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 52,670.99 Da | 43.04 | 85.25 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 203 | 446 | 1.64416E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 199 | 446 | 7.6E-54 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 6 | 55 | 1.0E-4 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 172 | 445 | 4.63E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 190 | 275 | 2.7E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 276 | 462 | 8.4E-53 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 453 | 35.113815 | IPR000719 |
| Coils | Coil | Coil | 439 | 459 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_022033104.1 | serine/threonine-protein kinase EDR1 [Helianthus annuus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VUT8 | Putative PAS domain, Protein kinase-like domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0031011 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 2 | Ftri12G02230, Ftri12G12330 |