Basic Information
Locus ID:
Ftri12G10345
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 13741506 | 13743233 | + | Ftri12G10345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.30 | 24,948.09 Da | 43.63 | 90.41 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 36 | 220 | 4.8E-94 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 55 | 173 | 1.83E-27 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 35 | 221 | 2.8E-100 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 221 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | XP_024966493.1 | 60S ribosomal protein L18-2 [Cynara cardunculus var. scolymus] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6MC85 | Ribosomal_L18e/L15P domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_33691 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology