Basic Information
Locus ID:
Ftri12G08386
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 120406439 | 120410079 | + | Ftri12G08386 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 54,034.27 Da | 40.27 | 83.27 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 359 | 428 | 1.6E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 32 | 347 | 1.0E-66 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 347 | 2.44E-70 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 354 | 450 | 3.1E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 31 | 352 | 4.3E-99 | - |
| SMART | SM00768 | X8_cls | 357 | 442 | 2.3E-45 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021980715.1 | glucan endo-1,3-beta-glucosidase 4 [Helianthus annuus] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VQ68 | Putative glycoside hydrolase family 17, X8 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0021641 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology