Basic Information
Locus ID:
Ftri12G08064
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 119868171 | 119871232 | - | Ftri12G08064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 56,740.86 Da | 38.44 | 102.00 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 348 | 499 | 1.9E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 320 | 503 | 4.72E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 216 | 1.42E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 92 | 219 | 3.0E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 91 | 1.8E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 507 | 1.2E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 306 | 422 | 1.3E-37 | - |
| SMART | SM00220 | serkin_6 | 345 | 522 | 8.7E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 345 | 526 | 30.237585 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 351 | 373 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021981103.1 | receptor-like kinase TMK4 [Helianthus annuus] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VRP8 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0022041 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology