Basic Information
Locus ID:
Ftri12G02230
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 126402340 | 126406187 | + | Ftri12G02230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 55,454.45 Da | 42.89 | 82.69 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 200 | 466 | 1.6243E-109 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 196 | 425 | 3.1E-53 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 169 | 427 | 2.7E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 273 | 482 | 2.0E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 187 | 272 | 9.9E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 194 | 469 | 37.078442 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 200 | 221 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06630.2 | - | 0 |
| RefSeq | XP_022033104.1 | serine/threonine-protein kinase EDR1 [Helianthus annuus] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VUT8 | Putative PAS domain, Protein kinase-like domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0031011 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 2 | Ftri12G02230, Ftri12G12330 |