Basic Information
Locus ID:
Ftri12G01197
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 125961206 | 125976179 | + | Ftri12G01197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 143,460.89 Da | 36.39 | 88.51 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 896 | 1034 | 3.4E-11 | IPR025886 |
| Pfam | PF00069 | Protein kinase domain | 2 | 218 | 8.4E-21 | IPR000719 |
| Pfam | PF14299 | Phloem protein 2 | 1103 | 1240 | 5.2E-12 | IPR025886 |
| Pfam | PF00069 | Protein kinase domain | 269 | 552 | 1.8E-45 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 601 | 835 | 2.0E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 566 | 847 | 3.69E-46 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 227 | 5.33E-40 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 248 | 562 | 6.34E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 31 | 233 | 4.1E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 573 | 660 | 2.3E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 234 | 346 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 347 | 572 | 2.0E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 661 | 870 | 1.5E-32 | - |
| SMART | SM00220 | serkin_6 | 571 | 848 | 5.3E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 267 | 558 | 5.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 558 | 37.544865 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 582 | 848 | 24.428511 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 230 | 21.559309 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 394 | 406 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 273 | 302 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021987328.1 | uncharacterized protein LOC110883969 isoform X1 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VTR2 | Protein kinase-like domain, Phloem protein 2-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0030341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |