Basic Information
Locus ID:
Ftri12G00442
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 123609047 | 123611843 | + | Ftri12G00442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 37,994.56 Da | 45.57 | 54.00 | -1.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 184 | 248 | 1.4E-11 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 350 | - | - |
| Coils | Coil | Coil | 197 | 222 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_022031523.2 | protein WVD2-like 4 [Helianthus annuus] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6P1V0 | TPX2 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14559 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology