Basic Information
Locus ID:
Ftri11G28305
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 590320 | 598623 | - | Ftri11G28305 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 55,181.61 Da | 38.40 | 103.67 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 88 | 134 | 4.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.2E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 300 | 498 | 1.4E-39 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 195 | 7.29E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 274 | 499 | 5.12E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 213 | 6.7E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 501 | 3.1E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 2.0E-36 | - |
| SMART | SM00220 | serkin_6 | 299 | 500 | 2.7E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 15.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 501 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_024987981.1 | protein NSP-INTERACTING KINASE 3-like [Cynara cardunculus var. scolymus] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6LHS0 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_4X5201 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology