Basic Information
Locus ID:
Ftri11G22235
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 95259971 | 95289399 | + | Ftri11G22235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 90,428.67 Da | 31.82 | 93.78 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 66 | 294 | 2.4E-27 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 665 | 788 | 1.0E-23 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 341 | 636 | 5.2E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 640 | 4.45E-70 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 302 | 1.62E-47 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 646 | 789 | 6.97E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 650 | 741 | 6.0E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 428 | 2.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 316 | 5.3E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 743 | 792 | 6.8E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 104 | 1.2E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 649 | 2.7E-54 | - |
| SMART | SM00220 | serkin_6 | 336 | 641 | 6.8E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 25 | 306 | 1.3E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 306 | 25.290686 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 663 | 793 | 22.209473 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 613 | 36.951237 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 669 | 694 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 476 | 488 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 342 | 364 | - | IPR017441 |
| Coils | Coil | Coil | 634 | 654 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23200.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021994451.2 | uncharacterized protein LOC110891100 [Helianthus annuus] | 0 |
| O22187 | Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251TCV2 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0347721 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |