Basic Information
Locus ID:
Ftri11G21458
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 3108531 | 3113351 | + | Ftri11G21458 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 88,322.71 Da | 38.39 | 80.22 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 95 | 291 | 5.49986E-104 | - |
| Pfam | PF00183 | Hsp90 protein | 308 | 753 | 1.7E-179 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 109 | 269 | 1.1E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 273 | 312 | 9.8E-7 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 608 | 729 | 6.02E-33 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 86 | 301 | 4.85E-63 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 327 | 585 | 5.16E-90 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 585 | 733 | 1.1E-50 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 325 | 497 | 3.5E-74 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 498 | 584 | 2.5E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 72 | 316 | 3.9E-91 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 108 | 270 | 1.1E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 53 | 775 | 2.7E-243 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 106 | 115 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 258 | 275 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 277 | 295 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 174 | 191 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 106 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 156 | 173 | 2.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 203 | 225 | 2.9E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 730 | 26.340727 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 780 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_022015301.1 | heat shock protein 90-5, chloroplastic [Helianthus annuus] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251S3K3 | Putative heat shock protein Hsp90 family, DNA mismatch repair protein family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0528551 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology