Basic Information
Locus ID:
Ftri11G20844
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 93263424 | 93266318 | - | Ftri11G20844 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 97,393.03 Da | 33.90 | 92.85 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 566 | 830 | 1.36557E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 562 | 825 | 2.0E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 60 | 1.6E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 322 | 355 | 3.8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 537 | 838 | 9.71E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 417 | 1.11E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 521 | 637 | 6.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 638 | 850 | 2.5E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 321 | 1.0E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 434 | 6.1E-23 | IPR032675 |
| SMART | SM00220 | serkin_6 | 560 | 831 | 4.6E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 373 | 397 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 0.066 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 560 | 831 | 35.566105 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 566 | 588 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 675 | 687 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 456 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021994197.1 | receptor-like kinase TMK4 [Helianthus annuus] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6P3C4 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_15069 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology