Basic Information
Locus ID:
Ftri11G18318
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 95815906 | 95821118 | - | Ftri11G18318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 72,210.97 Da | 41.13 | 91.61 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 202 | 465 | 2.7E-82 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 29 | 131 | 7.9E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 130 | 1.57E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 156 | 4.9E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 134 | 2.1E-6 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 202 | 490 | 84.365311 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.605647 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021994642.1 | BTB/POZ domain-containing protein At5g03250 isoform X1 [Helianthus annuus] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251TDN3 | Putative SKP1/BTB/POZ domain, NPH3 domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0350081 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology