HalophFGD

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Basic Information
Locus ID: Ftri11G18246
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 8251924 8252642 + Ftri11G18246
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.90 21,710.81 Da 42.79 82.49 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SMART SM00575 26again6 22 49 0.0057 IPR006564
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 11 47 9.482765 IPR007527
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_022032012.1 protein FAR1-RELATED SEQUENCE 4-like [Helianthus annuus] 0
TrEMBL A0A5N6NID7 Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_20512 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.