Basic Information
Locus ID:
Ftri11G17855
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Vacuolar protein sorting-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 97563313 | 97596188 | - | Ftri11G17855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 244,651.70 Da | 45.32 | 83.47 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06650 | SHR-binding domain of vacuolar-sorting associated protein 13 | 1402 | 1704 | 1.4E-11 | IPR009543 |
| Pfam | PF06101 | Vacuolar protein sorting-associated protein 62 | 408 | 539 | 1.6E-9 | IPR009291 |
| Pfam | PF06101 | Vacuolar protein sorting-associated protein 62 | 188 | 336 | 1.1E-11 | IPR009291 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 781 | 924 | 9.626303 | IPR000008 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1144 | 1171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 60 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48090.2 | - | 0 |
| RefSeq | XP_035834784.1 | uncharacterized protein LOC110887015 isoform X1 [Helianthus annuus] | 0 |
| TrEMBL | A0A5N6P276 | C2 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14268 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology