Basic Information
Locus ID:
Ftri11G17022
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Possibly involved in carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1544422 | 1546783 | + | Ftri11G17022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 49,169.37 Da | 36.34 | 90.42 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 364 | 435 | 2.6E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 346 | 1.2E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 347 | 6.63E-85 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 353 | 2.2E-115 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 447 | 1.8E-9 | - |
| SMART | SM00768 | X8_cls | 363 | 448 | 2.6E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 261 | 274 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_043624348.1 | glucan endo-1,3-beta-glucosidase 3-like [Erigeron canadensis] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2U1NAN9 | O-Glycosyl hydrolases family 17 protein OS=Artemisia annua OX=35608 GN=CTI12_AA289940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology