Basic Information
Locus ID:
Ftri11G16350
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 96244922 | 96251627 | - | Ftri11G16350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 147,979.97 Da | 40.37 | 87.02 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 352 | 650 | 1.8E-47 | IPR001245 |
| Pfam | PF14299 | Phloem protein 2 | 1025 | 1162 | 1.2E-12 | IPR025886 |
| Pfam | PF00069 | Protein kinase domain | 64 | 297 | 3.4E-20 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 683 | 946 | 2.0E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 968 | 1.34E-47 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 654 | 5.06E-74 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 305 | 2.22E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 669 | 9.8E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 324 | 9.0E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 106 | 3.9E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 758 | 968 | 6.6E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 442 | 5.3E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 756 | 9.5E-23 | - |
| SMART | SM00220 | serkin_6 | 346 | 654 | 8.1E-37 | IPR000719 |
| SMART | SM00220 | serkin_6 | 678 | 961 | 1.2E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 958 | 24.569851 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 303 | 20.753672 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 654 | 38.081955 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022040038.1 | uncharacterized protein LOC110942571 isoform X3 [Helianthus annuus] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MD14 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_33118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |