Basic Information
Locus ID:
Ftri11G11500
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 94946678 | 94950068 | + | Ftri11G11500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 77,433.36 Da | 32.27 | 85.13 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 41 | 298 | 4.7E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 299 | 1.78E-65 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 426 | 681 | 2.16E-21 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 425 | 514 | 1.3E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 318 | 3.0E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 685 | 9.3E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 104 | 4.7E-24 | - |
| SMART | SM00220 | serkin_6 | 36 | 292 | 1.5E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 692 | 9.884626 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 303 | 29.304741 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021973903.1 | uncharacterized protein LOC110868930 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UEH1 | Putative mitogen-activated protein (MAP) kinase kinase kinase, MLK1/MLK2/MLK4 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr07g0202381 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 4 | Ftri11G10406, Ftri11G11500, Ftri11G22459, Ftri11G28525 |