Basic Information
Locus ID:
Ftri11G11147
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 89270630 | 89273766 | - | Ftri11G11147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 110,019.13 Da | 33.79 | 101.92 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 706 | 898 | 6.3E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 69 | 4.7E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 170 | 191 | 0.089 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 530 | 588 | 5.3E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 348 | 3.06E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 252 | 599 | 2.04E-69 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 967 | 2.43E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 145 | 7.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 254 | 358 | 5.4E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 789 | 3.0E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 253 | 5.4E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 359 | 624 | 1.5E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 983 | 7.7E-50 | - |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 455 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 966 | 5.2E-24 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 973 | 35.170353 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 830 | 842 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 734 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1004 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_043610459.1 | MDIS1-interacting receptor like kinase 1 [Erigeron canadensis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1MPR0 | Leucine-rich repeat transmembrane protein kinase family protein OS=Artemisia annua OX=35608 GN=CTI12_AA353690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology