Basic Information
Locus ID:
Ftri11G10985
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 94742982 | 94744039 | + | Ftri11G10985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 37,310.47 Da | 44.21 | 69.88 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 212 | 1.6E-13 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 118 | 164 | 3.3E-7 | - |
| Pfam | PF12937 | F-box-like | 11 | 54 | 1.8E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 61 | 3.53E-10 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 91 | 292 | 2.75E-36 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 50 | 9.1E-6 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 61 | 303 | 4.2E-37 | IPR015915 |
| SMART | SM00256 | fbox_2 | 14 | 54 | 1.3E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 178 | 225 | 6.8E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 129 | 177 | 6.7E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021983402.1 | F-box/kelch-repeat protein At2g44130 [Helianthus annuus] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251VSC9 | Putative F-box domain, Galactose oxidase, beta-propeller OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0024791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology