Basic Information
Locus ID:
Ftri11G09296
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 4096680 | 4099997 | + | Ftri11G09296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 101,752.76 Da | 38.14 | 89.53 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 601 | 864 | 1.22325E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 62 | 3.2E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 599 | 857 | 1.8E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 365 | 0.0061 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 376 | 428 | 7.7E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 435 | 3.06E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 868 | 6.47E-80 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 453 | 1.1E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 554 | 672 | 3.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 321 | 1.4E-73 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 673 | 874 | 5.3E-53 | - |
| SMART | SM00369 | LRR_typ_2 | 88 | 110 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 595 | 861 | 4.8E-47 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 282 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 0.12 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 595 | 861 | 40.781551 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 720 | 732 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 601 | 623 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 467 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_022022574.1 | receptor protein kinase TMK1 [Helianthus annuus] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RTX6 | Putative leucine-rich repeat protein, plant-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0566051 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology