Basic Information
Locus ID:
Ftri11G08541
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 57378706 | 57385533 | - | Ftri11G08541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 55,116.26 Da | 41.55 | 83.76 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 17 | 267 | 1.18722E-118 | - |
| Pfam | PF00069 | Protein kinase domain | 18 | 266 | 5.1E-58 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 295 | 8.23E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 96 | 1.7E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 279 | 5.2E-47 | - |
| SMART | SM00220 | serkin_6 | 18 | 268 | 3.3E-71 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 268 | 41.544785 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 342 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_043609888.1 | serine/threonine-protein kinase Nek6-like [Erigeron canadensis] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6M7F0 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_31812 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology