Basic Information
Locus ID:
Ftri11G07758
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 85602933 | 85608213 | + | Ftri11G07758 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 59,338.93 Da | 38.71 | 85.49 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 312 | 1.63725E-131 | - |
| Pfam | PF13499 | EF-hand domain pair | 431 | 495 | 2.5E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 1.4E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 359 | 420 | 7.6E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 335 | 2.02E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 350 | 508 | 8.92E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 498 | 3.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 140 | 1.5E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 1.1E-60 | - |
| SMART | SM00054 | efh_1 | 360 | 388 | 3.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 432 | 460 | 6.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.86 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 2.3E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 55 | 313 | 1.6E-93 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 15.071314 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 46.958107 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 9.241175 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 13.732334 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 369 | 381 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
| Coils | Coil | Coil | 378 | 398 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_023742563.1 | calcium-dependent protein kinase 13 [Lactuca sativa] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2J6JW84 | Calcium-dependent protein kinase 13 OS=Lactuca sativa OX=4236 GN=LSAT_5X149341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology