HalophFGD

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Basic Information
Locus ID: Ftri11G07361
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: Far-red impaired response
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 88242658 88245097 - Ftri11G07361
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.64 38,681.76 Da 49.30 58.99 -0.97
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 116 150 8.839739 IPR007527
MobiDBLite mobidb-lite consensus disorder prediction 286 327 - -
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_022005502.1 protein FAR1-RELATED SEQUENCE 5 isoform X2 [Helianthus annuus] 0
TrEMBL A0A5N6PC97 FAR1 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_10679 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.