Basic Information
Locus ID:
Ftri11G04819
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Vacuolar protein sorting-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 97609812 | 97633241 | - | Ftri11G04819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 130,270.57 Da | 36.20 | 94.93 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 207 | 304 | 0.00245705 | - |
| Pfam | PF16910 | Repeating coiled region of VPS13 | 20 | 172 | 1.9E-15 | IPR031642 |
| SUPERFAMILY | SSF50729 | PH domain-like | 216 | 311 | 4.42E-7 | - |
| SMART | SM00233 | PH_update | 198 | 311 | 0.0017 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 573 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48090.1 | calcium-dependent lipid-binding family protein. | 0 |
| RefSeq | XP_035834784.1 | uncharacterized protein LOC110887015 isoform X1 [Helianthus annuus] | 0 |
| TrEMBL | A0A5N6P276 | C2 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14268 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology