HalophFGD

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Basic Information
Locus ID: Ftri11G04674
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 95289585 95294815 + Ftri11G04674
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.96 52,169.89 Da 36.74 87.22 -0.34
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14299 Phloem protein 2 164 288 5.4E-13 IPR025886
Pfam PF14299 Phloem protein 2 296 449 2.0E-20 IPR025886
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1 94 5.1E-9 -
Best hit
Source Best Hit ID Description E-value
TAIR AT1G80110.1 phloem protein 2-B11. 0
RefSeq XP_021994456.2 uncharacterized protein LOC110891106 [Helianthus annuus] 0
Swiss-Prot Q949S5 F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1 0
TrEMBL A0A251TCT5 Putative mitogen-activated protein (MAP) kinase kinase kinase Ste11, Cryptococcus OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0347381 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 23 Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ...
Ftri11G12618, Ftri11G16350, Ftri11G22235, Ftri11G26683, Ftri12G01197, Ftri12G13896, Ftri12G32636, Ftri14G00431, Ftri14G01357, Ftri14G02298, Ftri14G11112, Ftri14G21811, Ftri14G21935, Ftri17G06323, Ftri17G08969, Ftri17G10166, Ftri17G30653, Ftri18G09436, Ftri7G15466
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.