Basic Information
Locus ID:
Ftri10G33512
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 96446334 | 96455720 | + | Ftri10G33512 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 105,105.18 Da | 40.67 | 97.16 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 889 | 7.68438E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 149 | 209 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 4.3E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 620 | 886 | 3.0E-48 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 398 | 1.26E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 911 | 1.5E-80 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 290 | 5.0E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 587 | 692 | 3.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 911 | 8.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 381 | 6.3E-12 | IPR032675 |
| SMART | SM00220 | serkin_6 | 617 | 891 | 4.0E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 891 | 39.594292 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 926 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024981083.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Cynara cardunculus var. scolymus] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2J6KRS7 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_9X13441 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology