Basic Information
Locus ID:
Ftri10G32015
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12222366 | 12223921 | + | Ftri10G32015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 42,717.48 Da | 21.86 | 84.37 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 248 | 384 | 9.33468E-32 | IPR033734 |
| CDD | cd09612 | Jacalin | 40 | 169 | 1.069E-31 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 248 | 384 | 6.2E-18 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 42 | 172 | 7.7E-27 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 234 | 384 | 1.28E-33 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 28 | 172 | 8.37E-35 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 17 | 170 | 4.0E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 234 | 385 | 3.9E-41 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 248 | 386 | 3.3E-23 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 40 | 172 | 3.1E-25 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 28 | 172 | 38.499557 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 237 | 386 | 36.192272 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_022005625.1 | agglutinin [Helianthus annuus] | 0 |
| P82859 | Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VGS2 | Putative jacalin-like lectin domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0042261 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology