Basic Information
Locus ID:
Ftri10G25414
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 87106077 | 87108925 | + | Ftri10G25414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 44,358.57 Da | 31.73 | 101.39 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 76 | 336 | 2.0E-79 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 93 | 335 | 1.14E-36 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 103 | 397 | 5.7E-88 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 104 | 263 | 21.749878 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 274 | 340 | 18.959723 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 196 | 225 | 8.3E-52 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 364 | 381 | 8.3E-52 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 162 | 191 | 8.3E-52 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 278 | 306 | 8.3E-52 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 234 | 263 | 8.3E-52 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 311 | 340 | 8.3E-52 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_021988752.1 | DNA repair protein recA homolog 2, mitochondrial [Helianthus annuus] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251TLA5 | Putative RECA-like protein OS=Helianthus annuus OX=4232 GN=RECA3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology