Basic Information
Locus ID:
Ftri10G25229
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12240611 | 12243813 | + | Ftri10G25229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 36,069.84 Da | 24.05 | 77.98 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 188 | 324 | 5.91477E-26 | IPR033734 |
| CDD | cd09612 | Jacalin | 57 | 134 | 5.8309E-24 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 188 | 324 | 1.7E-16 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 58 | 135 | 7.3E-19 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 176 | 324 | 1.96E-30 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 135 | 7.2E-30 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 179 | 325 | 3.5E-35 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 8 | 135 | 2.7E-31 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 188 | 326 | 1.5E-17 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 28 | 136 | 1.1E-8 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 136 | 28.970289 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 177 | 326 | 31.990391 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_035836912.1 | agglutinin [Helianthus annuus] | 0 |
| P82859 | Agglutinin OS=Castanea crenata OX=103480 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VEW3 | Putative mannose/glucose-specific lectin OS=Helianthus annuus OX=4232 GN=LEC PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology