Basic Information
Locus ID:
Ftri10G25207
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 730345 | 744898 | + | Ftri10G25207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 56,433.32 Da | 42.65 | 73.31 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 217 | 253 | 0.14 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 41 | 499 | 9.77E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 72 | 505 | 6.3E-24 | IPR015943 |
| SMART | SM00320 | WD40_4 | 390 | 421 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 264 | 304 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 214 | 253 | 0.94 | IPR001680 |
| SMART | SM00320 | WD40_4 | 33 | 68 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 363 | 200.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 14 | 507 | 6.4E-181 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 223 | 237 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 476 | 505 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 281 | 309 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 368 | 393 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 47 | 67 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 253 | 280 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 394 | 420 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 340 | 367 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 124 | 152 | 3.2E-123 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 225 | 252 | 3.2E-123 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 168 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.1 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_022009373.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Helianthus annuus] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VCK3 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Helianthus annuus OX=4232 GN=2ABB PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology