Basic Information
Locus ID:
Ftri10G22623
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 95761198 | 95763831 | + | Ftri10G22623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 62,084.98 Da | 29.19 | 91.00 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 18 | 179 | 1.1248E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 377 | 551 | 2.97462E-74 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 212 | 329 | 1.5E-18 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 416 | 539 | 1.9E-13 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 15 | 182 | 2.5E-34 | IPR012001 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 194 | 354 | 1.12E-31 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 377 | 561 | 1.22E-35 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 15 | 192 | 3.86E-43 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 11 | 187 | 3.5E-60 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 201 | 364 | 3.5E-38 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 371 | 553 | 3.5E-47 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 9 | 563 | 1.5E-196 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_024981015.1 | pyruvate decarboxylase 2-like [Cynara cardunculus var. scolymus] | 0 |
| P51846 | Pyruvate decarboxylase 2 OS=Nicotiana tabacum OX=4097 GN=PDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6MPJ6 | pyruvate decarboxylase OS=Mikania micrantha OX=192012 GN=E3N88_31424 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology