Basic Information
Locus ID:
Ftri10G22479
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
PDC3
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 101819614 | 101822499 | - | Ftri10G22479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 59,664.05 Da | 24.96 | 93.14 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 47 | 208 | 3.15347E-90 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 406 | 535 | 1.44065E-71 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 241 | 358 | 2.8E-22 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 44 | 212 | 1.3E-35 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 451 | 514 | 2.0E-12 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 406 | 540 | 1.09E-32 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 236 | 383 | 4.62E-35 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 44 | 219 | 2.64E-44 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 399 | 546 | 4.3E-44 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 231 | 393 | 2.5E-43 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 41 | 217 | 9.8E-61 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 39 | 551 | 2.4E-198 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_021988384.1 | pyruvate decarboxylase 2 [Helianthus annuus] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6PFY1 | pyruvate decarboxylase OS=Mikania micrantha OX=192012 GN=E3N88_11633 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology