Basic Information
Locus ID:
Ftri10G18432
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 19245619 | 19253848 | - | Ftri10G18432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 39,981.50 Da | 48.91 | 79.39 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 300 | 348 | 1.2E-11 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 298 | 352 | 5.91E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 257 | 4.4E-20 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 272 | 4.4E-7 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 298 | 350 | 2.0E-16 | - |
| SMART | SM00326 | SH3_2 | 296 | 351 | 9.4E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 293 | 352 | 20.583284 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 287 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
| Coils | Coil | Coil | 148 | 168 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_024972890.1 | SH3 domain-containing protein 2-like [Cynara cardunculus var. scolymus] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6PBV4 | SH3 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_10529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology