Basic Information
Locus ID:
Ftri10G14411
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 99734602 | 99739678 | - | Ftri10G14411 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 12,939.77 Da | 42.52 | 89.24 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 2.22991E-40 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 117 | 7.8E-34 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 95 | 5.07E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 4.7E-37 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 119 | 1.1E-40 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 79 | 11.87769 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_021987582.1 | membrane-anchored ubiquitin-fold protein 3 [Helianthus annuus] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251TH72 | Membrane-anchored ubiquitin-fold protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0283861 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology