Basic Information
Locus ID:
Ftri10G13810
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11320203 | 11322002 | + | Ftri10G13810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 67,425.38 Da | 41.27 | 94.16 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 187 | 224 | 0.00384523 | IPR018392 |
| Pfam | PF01476 | LysM domain | 187 | 225 | 0.0013 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 349 | 580 | 9.0E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 311 | 583 | 3.05E-62 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 180 | 236 | 7.1E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 592 | 7.3E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 391 | 1.7E-13 | - |
| ProSiteProfiles | PS51782 | LysM domain profile. | 180 | 224 | 9.482546 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 585 | 31.113894 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_022019770.2 | lysM domain receptor-like kinase 4 [Helianthus annuus] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VHN0 | Putative concanavalin A-like lectin/glucanase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0045871 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology