Basic Information
Locus ID:
Ftri10G07324
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12396453 | 12398331 | + | Ftri10G07324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 36,303.43 Da | 20.68 | 88.31 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 49 | 167 | 1.17486E-24 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 47 | 169 | 2.2E-16 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 206 | 327 | 5.4E-11 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 191 | 327 | 1.44E-21 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 24 | 169 | 3.27E-29 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 187 | 329 | 2.4E-27 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 15 | 168 | 1.1E-30 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 35 | 169 | 4.5E-10 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 206 | 331 | 1.1E-4 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 195 | 332 | 26.325356 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 24 | 169 | 31.371365 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52030.1 | myrosinase-binding protein 2. Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers. | 0 |
| RefSeq | XP_035836912.1 | agglutinin [Helianthus annuus] | 0 |
| Q9SAV1 | Myrosinase-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=F-ATMBP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6PBQ2 | Jacalin-type lectin domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_10469 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology