Basic Information
Locus ID:
Ftri10G05819
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 92923027 | 92926194 | - | Ftri10G05819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 54,694.47 Da | 41.69 | 96.85 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 321 | 467 | 1.3E-20 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 22 | 272 | 1.6E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 272 | 2.7E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 297 | 467 | 3.01E-35 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 298 | 389 | 7.6E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 390 | 472 | 2.1E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 95 | 5.5E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 96 | 292 | 2.9E-42 | - |
| SMART | SM00220 | serkin_6 | 16 | 279 | 3.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 280 | 29.658091 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 317 | 479 | 19.15653 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 141 | 153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 323 | 344 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021978609.1 | receptor-like kinase LIP2 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UA42 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0237421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri10G05819, Ftri10G09137, Ftri6G09594 |