Basic Information
Locus ID:
Dusal.4989s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ankyrin repeats (many copies)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4989 | 251 | 1046 | + | Dusal.4989s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 28,040.03 Da | 50.44 | 92.52 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13857 | Ankyrin repeats (many copies) | 167 | 212 | 2.8E-10 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 58 | 131 | 1.3E-8 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 21 | 213 | 3.95E-34 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 16 | 134 | 6.3E-21 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 138 | 229 | 8.3E-15 | IPR036770 |
| SMART | SM00248 | ANK_2a | 21 | 49 | 730.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 53 | 82 | 250.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 173 | 202 | 8.2E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 121 | 166 | 640.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 88 | 117 | 1.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 88 | 120 | 9.13699 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 173 | 205 | 11.11353 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 173 | 205 | 9.754822 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039130280.1 | protein ACCELERATED CELL DEATH 6-like isoform X2 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A6H5J2V6 | ANK_REP_REGION domain-containing protein OS=Trichogramma brassicae OX=86971 GN=TBRA_LOCUS15574 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 14 | Dusal.0002s00084.v1.0, Dusal.0047s00008.v1.0 ... |