Basic Information
Locus ID:
Dusal.1548s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
protein ubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1548 | 7886 | 15564 | + | Dusal.1548s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 19,982.49 Da | 41.29 | 82.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 21 | 91 | 3.2E-11 | IPR020683 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 132 | 182 | 5.36E-5 | IPR035897 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 32 | 93 | 1.24E-16 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 28 | 101 | 2.4E-18 | IPR036770 |
| Gene3D | G3DSA:3.40.50.10140 | - | 104 | 187 | 2.6E-8 | IPR035897 |
| SMART | SM00248 | ANK_2a | 68 | 97 | 31.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 35 | 64 | 1.5E-5 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 35 | 67 | 13.73111 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 35 | 67 | 12.354897 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 130 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002505407.1 | predicted protein, partial [Micromonas commoda] | 0 |
| Q6GQX6 | Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus OX=10090 GN=Anks6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S1J3W2 | ANK_REP_REGION domain-containing protein OS=Ostreobium quekettii OX=121088 GN=OSTQU699_LOCUS3561 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |