Basic Information
Locus ID:
Dusal.1421s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ion transport protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1421 | 1017 | 27013 | + | Dusal.1421s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 47,434.51 Da | 46.25 | 79.42 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13676 | TIR domain | 111 | 204 | 3.3E-10 | IPR000157 |
| Pfam | PF13637 | Ankyrin repeats (many copies) | 1 | 44 | 5.1E-10 | - |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 99 | 191 | 2.35E-8 | IPR035897 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 2 | 60 | 7.62E-17 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 1 | 64 | 7.6E-19 | IPR036770 |
| Gene3D | G3DSA:3.30.830.10 | - | 337 | 427 | 1.2E-6 | - |
| Gene3D | G3DSA:3.40.50.10140 | - | 74 | 212 | 4.7E-12 | IPR035897 |
| SMART | SM00248 | ANK_2a | 23 | 52 | 1.9E-6 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 23 | 55 | 14.29202 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 1 | 22 | 10.36565 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 23 | 55 | 12.912056 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 1 | 22 | 9.011944 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 104 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042920233.1 | uncharacterized protein CHLRE_10g443850v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7R9VEH2 | TIR domain-containing protein OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS11023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |