Basic Information
Locus ID:
Dusal.1153s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1153 | 17528 | 28317 | + | Dusal.1153s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 34,584.99 Da | 50.27 | 59.34 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 274 | 313 | 1.0E-11 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 271 | 315 | 9.07E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 260 | 316 | 1.6E-15 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 274 | 313 | 11.905141 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 274 | 313 | - | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 228 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| Q9H7B4 | Histone-lysine N-methyltransferase SMYD3 OS=Homo sapiens OX=9606 GN=SMYD3 PE=1 SV=4 | 0 | |
| TrEMBL | A0A7S3VRN3 | 3'-5' exonuclease domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS15322 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0005s00050.v1.0, Dusal.0043s00004.v1.0 ... |